The invention relates to a seedling growing method of apocarya and belongs to the technical field of fruit trees and forest cultivation. The method includes the steps of sprouting breeding, grafting and post-grafting management. By means of the method, a large amount of scions are obtained each year and are grafted on the stock and the seedling with strong affinity in due time, so that stock grafting survival rate of the apocarya is improved. Grafted seedling preserving rate after large-amount grafting is over 90%. Further, the method achieves tree body stuntedness, shortens the juvenile phase and enables tree bodies to fruit earlier in the fourth year after grafting. The fruiting time is 6-8 years earlier than before. Simultaneously, the method provides a growing method for apocarya stock grafting seedlings and with strong operability for batch and variety seedling growing of the apocarya and greatly increases economical value of the apocarya.