The invention relates to a GIS-based smart city management special vehicle monitoring system, which takes an LBS system as a framework and a browser as a display platform. The system comprises a real-time monitoring service module, which provides positioning parameters for a historical track service module and a work and rest monitoring service module; the historical track service module, which can present the historical driving tracks of special vehicles on a digital map; a statistical analysis module, which can search historical boundary-crossing information of the special vehicles; and an electronic fence service module, which can carry out driving restriction on the special vehicles in some area, and can manage the special vehicles conveniently. The GIS-based smart city management special vehicle monitoring system realizes real-time monitoring of the special vehicles, facilitates to carry out basic data monitoring and command and dispatch on the special vehicles during city management, can present and display the historical driving tracks of the special vehicles, can trigger an alarm when the special vehicles cross boundaries, and can improve level of informatization of a supervision department and reduce management cost.