Provided are an imaging apparatus, a flicker detection method, and a flicker detection program that can accurately detect a flicker even in a case in which an image of a bright object is captured. A digital camera directs a MOS imaging element 5 to perform a plurality of imaging operations at an arbitrary frame rate and compares captured image signals which are read from the imaging element 5 for frame periods F1 and F2 based on the frame rate to detect whether a flicker has occurred. The end time of a signal reading period in the frame period F1 is before the end time of the frame period F1 and the end time of a signal reading period in the frame period F2 coincides with the end time of the frame period F2.