The invention discloses a flexible micro-atomizing ophthalmic apparatus, which comprises a medicine liquid container, wherein a micro-atomizing pump is arranged at the end of the medicine liquid container; a medicine liquid conduit, which extends to the bottom of the medicine liquid container, and a micro-atomizing nozzle, which extends to the exterior of the medicine liquid container, are arranged on the micro-atomizing pump; a medicine applying eye patch, which is of a trumpet-shaped structure, is connected to the micro-atomizing nozzle; and the medicine applying eye patch is made from a flexible material. The flexible micro-atomizing ophthalmic apparatus, in a using process, can implement such operations as disinfecting, cleaning, treating and the like on eyes of a user under the precondition of preventing the user from adjusting eye states by himself.