The utility model provides a water source well management control system which comprises the components of a submersible pump in a water source well, a flow sensor, a pressure sensor, a submersible pump automatic protector, and a level meter which is used for detecting the level height of the water source well; wherein the flow sensor, the pressure sensor, the submersible pump automatic protector and the level meter are arranged at the water source well mouth. The submersible pump automatic protector is connected with the submersible pump. The flow sensor and the pressure sensor are all arranged on the outlet pipe of the water source well mouth. Centralized allocation and unified management for the water source well are realized. Through performing digital management, analysis and determination on production parameters such as flow, pressure, water level and three-phase voltage, working condition determination for the water source well is realized. Furthermore the water source well management control system performs fault early-warning and analyzes a result.