Systems and methods for predicting a shape are provided. A system for predicting a shape can include a database, a training analysis module, a subject analysis module, and a prediction module. The database can store two sets of training models characterized by first and second parameters, respectively (e.g., bone and cartilage), as well as a subject model characterized by the first parameter (e.g., a bone model). One of the sets of training models can include 2D medical image data or 2D anatomical models and the other can include 3D anatomical models. The relationships between these models can be determined by a training analysis module and a subject module. Based on these relationships, the prediction module can generate a predicted shape characterized by the second parameter (e.g., a predicted cartilage model corresponding to the bone model).