A liquid ejection apparatus includes a supply control section 401 that controls the supply and stop of a liquid to pressure chambers communicating with ejection ports to eject the liquid, and a negative pressure generating section 1004 that generates a negative pressure. The liquid ejection apparatus also includes a negative pressure control unit 230 using the negative pressure generated by the negative pressure generating section 1004 to adjust the pressure of the liquid flowing through a collection channel. To stop a flow of the liquid, the supply control section 401 stops the supply of the liquid, and then the negative pressure generating section 1004 is stopped.