A method and apparatus are disclosed from the perspective of a User Equipment (UE). In one embodiment, the method includes the UE receiving a first control information which schedules a transmission of a first data transmission with data transmission period of a first time interval. The method also includes the UE receiving a second control information which schedules a transmission of a second data transmission with data transmission period of a second time interval, wherein the first data transmission and the second data transmission does not overlap in time domain. The method further includes the UE performing a processing to the first data transmission according to the first control information, and the UE does not perform the processing to the second data transmission according to the second control information.