An automatic object identification scanner is equipped with recognition units that provide detection results for objects and a controller that resolves potential conflicts in the results. One form of recognition unit detects product identifiers and flags in a digital payload that is encoded redundantly across packaging or labels applied to packaging. The controller gets detection results and evaluates them relative to a state data structure, which maintains state for identifiers obtained within a time interval, such as a timeout interval or waiting period after a detection result. Identifiers are reported to a POS system depending on logic that evaluates code priority and pending waiting periods.