A pressure disturbance rejection valve assembly is provided. The valve assembly includes a valve, a flow rate sensor, and an actuator. The actuator includes a motor, a drive device configured to be driven by the motor and coupled to the valve for driving the valve within a range of positions, and a position sensor configured to measure a rotational position of the drive device. The actuator further includes a communications mechanism configured to receive a flow rate setpoint and a processing circuit. The processing circuit is configured to determine an actuator position setpoint using a feedback control mechanism based on the flow rate setpoint and the flow rate measurement, operate the motor to drive the drive device to the actuator position setpoint, detect a fault condition based at least in part on the rotational position measurement or the flow rate measurement, and perform a fault mitigation action in response to detection of the fault condition.