A fuel supply system for fuel injectors of a multi-stage combustor of a gas turbine engine is provided. The system has a metering and splitting arrangement which receives a pressurised fuel flow and controllably meters and splits the received flow into metered pilot and mains flows for injecting respectively at pilot and mains fuel discharge orifices of the injectors to perform staging control of the combustor. The system further has pilot and mains fuel distribution pipeworks respectively distributing fuel from the metering and splitting arrangement to the pilot and mains discharge orifices. The system further has a controller which is configured to command the metering and splitting arrangement to provide the metered flows, to select the pilot distribution pipework and deselect the mains distribution pipework for pilot-only operation.