An engine control system may be configured to perform a method of controlling thermal bias in a turbomachine. An exemplary method may include determining a thermal bias-value for the turbomachine, and performing a cooling treatment based at least in part on the thermal bias-value. The thermal bias-value may include a difference between an upward temperature-value corresponding to a first one or more temperature measurements of an upward portion of the turbomachine and a downward temperature-value corresponding to a second one or more temperature measurements of a downward portion of the turbomachine. The cooling treatment may include at least one of: circulating air through at least a portion of the turbomachine, and rotating a shaft of the turbomachine with a motoring system.