An apparatus includes a processor and a machine-readable medium having program code executable by the processor to cause the apparatus to obtain a scan result based on a core sample, generate a set of contours of the scan result, and generate a set of object associations, wherein the set of object associations includes a first object association that is associated with a first contour from the set of contours and a second contour from the set of contours. The program code also generates a set of contour connections, wherein the set of contour connections includes a first contour connection that is based on the first object association. The program code also generates a reconstructed core having a three-dimensional space based on the set of contour connections, wherein the three-dimensional space includes a volume greater than the core sample.