The present disclosure provides a method and apparatus for maintaining computer software of a supervisory control unit (SCU) of an industrial control system (ICS) configured to control equipment of a facility. The method includes capturing status information for the SCU and equipment that indicates at least performance of the SCU and the equipment, and connectivity of the SCU with the equipment. The method includes patching the computer software automatically to update, change, fix, or improve the computer software. The method includes capturing corresponding status information for the SCU and equipment and performing an audit of the ICS after the patch in which the status information and the corresponding status information are compared to identify any deviations in the performance or the connectivity of the equipment resulting from the patch. The method includes generating an audit report of the ICS that indicates any of the deviations that satisfy a reporting threshold.