A precise deep oil and gas navigation system based on structural evaluation of a sand/shale formation, and a device are provided. The precise deep oil and gas navigation system is implemented by: acquiring basic data of a target well location as well as basic data and an acoustic LWD curve of an adjacent well; dividing a basic data group; retaining extremely strongly correlated data and strongly correlated data of the basic data group, and performing dimensionality reduction; constructing a three-dimensional fusion feature data volume based on a dimensionality-reduced fusion feature parameter and a time-frequency spectrum; predicting a missing curve according to the three-dimensional fusion feature data volume; and correcting a stratigraphic structure model based on the missing curve to guide the design of a drilling trajectory.