Methods for manufacturing thermoformed objects are provided. In some embodiments, a method includes controlling a material transport system to move a material to a first location proximate to one or more heat sources. The method can include controlling the one or more heat sources to heat a first region of the material to a first temperature and heat a second region of the material to a second temperature. The method can also include controlling the material transport system to move the material to a second location proximate to an object forming element, and controlling the object forming element to form a dental appliance from the material.