A method is provided for performing handoff in a communication system including a serving base station (BS) in communication with a mobile station (MS), at least one neighbor BS using a communication scheme different from a communication scheme of the serving BS, and the MS capable of communicating with the neighbor BS. The method includes compensating a signal strength of one of the serving BS and the neighbor BS, received at the MS, such that handoff decision is possible, and determining whether to perform a handoff of the MS, using the compensated signal strengths.