A method for segmenting organs in digitized medical images includes providing a set of segmented training images of an organ, computing a surface mesh having a plurality of mesh cells that approximates a border of the organ, extracting positive examples of all mesh cells and negative examples in the neighborhood of each mesh cell which do not belong to the organ surface, training from the positive examples and negative examples a plurality of classifiers for outputting a probability of a point being a center of a particular mesh cell, computing an active shape model using a subset of center points in the mesh cells, generating a new shape by iteratively deforming the active shape model to fit a test image, and using the classifiers to calculate a probability of each center point of the new shape being a center of a mesh cell which the classifier was trained to recognize.