A computer implemented method, a computer program product, and data processing system clone virtual machines in a virtual desktop environment. A request to clone a new virtual machine is intercepted, wherein the request was initially sent to a virtual management server. Responsive to intercepting the request, the new virtual machine is cloned from a snapshot of a master virtual machine. A delta file is created for the new virtual machine, wherein the delta file includes a base disk reference and a copied delta file. The new virtual machine is configured to read a base disk image from a snapshot of the master virtual machine. The new virtual machine is configured to write data to the copied delta file in the delta file.