Sub-nanosecond single ion beam pulses are generated by means of one embodiment of the invention. In this embodiment, an ion source provides ions to a radio frequency quadrupole linear accelerator comprising electrodes. A power source is used to apply radio frequency alternating currents to the electrodes. A device is used to inject ions from the ion source to the accelerator, causing the accelerator to provide only a single sub-nanosecond output beam pulse at a time.