A mechanism is provided to detect that a dynamic migration of a virtual environment is in progress or has been executed during a hardware or software scan without requiring instrumentation of applications running within the virtual machine. The mechanism relies on a particular sequencing and usage of application programming interfaces and commands that scanning technology provides, associated with the modularity of the scans and on the external virtual machine enabler component running on the host. The mechanism may detect a dynamic migration and take proper actions based on the system configuration. The actions may include discarding the output of the scan executed across a dynamic migration and repeat the scan. The actions may also include notifying the initialization subsystem of the non-migration-safe application to execute a script or program to address migration safety issues. One particular program or script may be an agent ID regeneration program or script.