A system, a method, and a computer program product for managing delta version chains are provided. A version chain having a plurality of versions of data is provided. A first delta-compressed version and a second delta-compressed version corresponding to a first version of data in the version chain and a second version of data in the version chain, respectively, are selected. A third delta-compressed version configured to be independent of at least one of the first delta-compressed version and the second delta-compressed version and further configured to contain at least one third instruction determined based on at least one of the following: the first insert instruction, the second insert instruction, the first copy instruction, and the second copy instruction, is generated.