A control system for a motor includes an angle determination module, a control module, an angle generation module, and an estimator module. The angle determination module generates an output rotor angle indicative of a desired angle of a rotor of the motor. The control module controls current supplied to the motor based on the output rotor angle. The angle generation module generates a commanded rotor angle in response to a commanded speed. The estimator module determines an estimated rotor angle of the motor. Upon startup of the motor, the angle determination module generates the output rotor angle based on the commanded rotor angle. Upon beginning of a transition period, the angle determination module generates the output rotor angle based on the commanded rotor angle and the estimated rotor angle. Upon ending of the transition period, the angle determination module generates the output rotor angle based on the estimated rotor angle.