The present invention provides a method for manufacturing a metamaterial dielectric substrate, and a metamaterial dielectric substrate manufactured using the same. According to the metamaterial dielectric substrate and the manufacturing method thereof of the present invention, an arrangement rule of pin-shaped articles in a pin-shaped array may he predetermined during the manufacture, such that the formed metamaterial dielectric substrate has pinhole-shaped arrays arranged in a specific rule. Therefore, the metamaterial dielectric substrate may implement specific modulation functions on an electromagnetic wave such as electromagnetic wave divergence, convergence or deflection, thereby providing a more flexible design for function application of the metamaterial.