One aspect of the present disclosure is directed to a fuel cell power system. The system may include one or more fuel cells configured to generate electric power and a compressor configured to supply compressed air to the one or more fuel cells. The system may further include one or more sensors. The sensors may be configured to generate a signal indicative of at least one measured parameter of air flow across the one or more fuel cells. The system may also include a controller in communication with the one or more fuel cells, the compressor, and the sensors. The controller may be configured to determine a desired pressure drop based on at least one calculated parameter, determine a control command for the compressor based on the desired pressure drop, and adjust the control command based on a feedback gain parameter and a feed forward gain parameter.