The disclosed embodiments illustrate methods and systems for scheduling one or more first vehicles along a route in a transportation system. The method includes determining one or more demands pertaining to a commutation along a route, where the route comprises at least one pair of stations such that there is a unique path between the pair of stations. The method further includes determining a set of constraints associated with the transportation system. The set of constraints are based on at least a count of second vehicles plying on one or more routes in the transportation system at a time instance, a capacity of a first vehicle, and a performance metric of the transportation system. Further, the method includes determining a count of first vehicles, for plying along the route at the time instance, based on at least the set of constraints.