IOMMU map-in may be overlapped with second tier memory access, such that the two operations are at least partially performed at the same time. For example, when a second tier memory read into a storage device controller internal buffer is initiated, an IOMMU mapping may be built simultaneously. To achieve this overlap, a two-stage command buffer is used. In a first stage, content is read from a second tier memory address into the storage device controller internal buffer. In a second stage, the internal buffer is written into the DRAM physical address.