A cloud-based gene analysis service platform includes: a communication module configured to communicate with a terminal connected to a laboratory; a controller configured to monitor generation of information on a genome corresponding to an individual through the communication module; and a storage unit configured to encrypt and store the generated information on the genome, wherein the controller performs analysis on the basis of the information on the genome and personal phenotypic information. Accordingly, it is possible to effectively protect gene information and provide individual customized service.