A system includes a controller having at least one processing circuit including at least one memory coupled to at least one processor. The controller is configured to: receive data regarding operation of an engine indicating that one or more cylinders of a plurality of cylinders of the engine is compromised; cause the engine to operate in a modified engine operating mode whereby operation of the one or more cylinders that is compromised is modified; cause the engine to operate in a non-modified engine operating mode whereby operation of the one or more cylinders that is compromised is not modified responsive to receiving information regarding a predetermined condition despite the data regarding operation of the engine indicating that the one or more cylinders of the plurality of cylinders of the engine is compromised.