After an ignition switch is turned off, in order to suppress operation of an air compressor and thereby reduce noise, liquid droplets residing in an oxygen-containing gas flow field as well as liquid droplets residing in a fuel gas flow field are removed during separate time periods, such that the flow rate in the oxygen-containing gas flow field and the flow rate in the fuel gas flow field do not become large at the same time. Then, an electrolyte membrane is dried using an oxygen-containing gas, in order to improve the performance upon starting a next operation.