A method of navigating through audio files and an apparatus for playing back audio files using the method are provided. The apparatus for playing back audio files includes an input module which receives from a user a command to switch the apparatus to a navigation mode, a storage module which stores a plurality of audio files, each audio file comprising a highlight section, a control module which extracts the audio files from the storage module in response to the command received by the input module and plays back the highlight sections of the audio files while adjusting a volume level for each of the audio files, and an output module which outputs to the user the highlight sections of the audio files played back by the control module.