A method is provided for reducing degradation in a fuel cell assembly, including at least one fuel cell with a PBI membrane, during standby, operation. The method may include electrochemically consuming an oxidant from a cathode coupled to the PBI membrane in response to a disconnection of an external load and supplying fuel to remove or electrochemically consume any back-diffused oxidant to the associated fuel cell sufficient to replace or consume the back-diffused oxidant while the external load is removed, and/or also may include controlling a standby temperature of the fuel cell. In this way, it may be possible to avoid increased cell voltage decay associated with degradation of the PBI in a simple and cost effective system.