A method and disk drive for calibrating a phase of a clock in the disk drive. The phase of the clock in the disk drive is changed such that a rate of change for the phase is substantially constant. A pattern of data is written to a magnetic material in the disk drive after the rate of change for the phase becomes substantially constant and while changing the phase of the clock. A selected phase of the clock at which the pattern of data that is written on the magnetic material has a desired quality is identified using the rate of change for the phase, a first point in time at which a timing mark on the magnetic material is read, a second point in time at which the timing mark is read, and a third point in time at which the pattern of data has the desired quality.