Provided is a fuel cell system which can accurately detect the water state of a fuel cell to appropriately control the water content of the fuel cell. Based on an FC outlet temperature detected by a temperature sensor, an FC outlet temperature change speed detection unit detects an FC outlet temperature change speed for a unit time. If the FC outlet temperature change speed detection unit judges that the detected FC outlet temperature change speed is lower than a change speed reference value stored in a memory, an impedance measurement instruction is transmitted to an impedance calculation unit. On receiving the impedance measurement instruction from the FC outlet temperature change speed detection unit, the impedance calculation unit performs the impedance measurement for the second time. In consequence, it is possible to realize such scavenging control as to keep the water content of a fuel cell at an appropriate level by the minimum number of impedance measurement times (e.g., twice).