A system, apparatus, method and computer program product are provided for configuring disparate workstations. In particular, an administrative utility is provided that may allow users to upload to a configuration server individual configuration files for applications executing on workstations associated with physiological devices. Once uploaded, a user may group the configuration files into configuration groups based, for example, on similarities in configurations utilized. Once a configuration group has been created, the user may assign one or more workstations to each configuration group. Upon startup of a workstation, an application executing on the workstation may automatically transmit a request to the configuration server to load the configurations for that workstation. In response, the configuration server may determine to which configuration group the workstation has been assigned, and then download the configuration files of that configuration group to the workstation. The downloaded configuration files may then control the behavior of the application.