A dosing control system for a vehicle includes a current storage module, an adaption triggering module, and an adaption ending module. The current storage module estimates an amount of ammonia stored by a selective catalytic reduction (SCR) catalyst. The adaptation triggering module triggers a reduction of the amount of ammonia stored by the SCR catalyst to zero when a first amount of nitrogen oxides (NOx) measured by a first NOx sensor located downstream of the SCR catalyst is greater than a predicted value of the first amount of NOx. The adaptation ending module selectively ends the reduction and enables injection of dosing agent based on a comparison of the first amount of NOx with a second amount of NOx upstream of the SCR catalyst.