Invention Grant
US08855938B2 Minimization of surprisal data through application of hierarchy of reference genomes
有权
通过应用参考基因组层次来最小化惊奇的数据
- Patent Title: Minimization of surprisal data through application of hierarchy of reference genomes
- Patent Title (中): 通过应用参考基因组层次来最小化惊奇的数据
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Application No.: US13475183Application Date: 2012-05-18
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Publication No.: US08855938B2Publication Date: 2014-10-07
- Inventor: Robert R. Friedlander , James R. Kraemer
- Applicant: Robert R. Friedlander , James R. Kraemer
- Applicant Address: US NY Armonk
- Assignee: International Business Machines Corporation
- Current Assignee: International Business Machines Corporation
- Current Assignee Address: US NY Armonk
- Agency: Brown & Michaels, PC
- Agent John R. Pivnichny
- Main IPC: G06F7/00
- IPC: G06F7/00 ; G01N19/00

Abstract:
A method, computer product, and computer system of minimizing surprisal data comprising: at a source, reading and identifying characteristics of a genetic sequence of an organism; receiving an input of rank of at least two identified characteristics of the genetic sequence of the organism; generating a hierarchy of ranked, identified characteristics based on the rank of the at least two identified characteristics of the genetic sequence of the organism; comparing the hierarchy of ranked, identified characteristics to a repository of reference genomes; and if at least one reference genome from the repository matches the hierarchy of ranked, identified characteristics, comparing nucleotides of the genetic sequence of the organism to nucleotides from the at least one matched reference genome, to obtain differences and create surprisal data.
Public/Granted literature
- US20130311101A1 MINIMIZATION OF SURPRISAL DATA THROUGH APPLICATION OF HIERARCHY OF REFERENCE GENOMES Public/Granted day:2013-11-21
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