A machine vision system program editing environment including synchronized selection and/or identification of related features in a plurality of different user interface windows is provided. In particular, one of the windows is an editing window where a part program representation is displayed for editing by a user. In one embodiment, a user may select data or another feature of interest in a window that is not the editing window (e.g., a results window, or graphical workpiece inspection feature display window) and the associated part program instruction representation is automatically highlighted and/or selected in the editing window. Conversely, a part program instruction representation may be selected by a user in the editing window and the associated results or feature in another window is automatically highlighted and/or selected. User interface navigation, rapid program quality assessment, and overall part program creation and editing efficiency are significantly enhanced in such an editing environment.