A method for operating an active noise reduction system that is designed to reduce the harmonic or sinusoidal noise emanating from a rotating device, where there is an active noise reduction system input signal that is related to the frequency of the noise to be reduced, and where the active noise reduction system comprises one or more adaptive filters that output a generally sinusoidal noise reduction signal that is used to drive one or more transducers with their outputs directed to reduce the noise. Distortions of the noise reduction signal are detected. A distortion is based at least in part on differences between the frequency of the noise reduction signal and the frequency of the harmonic noise. The noise reduction signal is altered based on the detected distortion.