A system includes a physical analysis module, a cyber analysis module, and a determination module. The physical analysis module is configured to obtain physical diagnostic information, and to determine physical analysis information using the physical diagnostic information. The cyber analysis module is configured to obtain cyber security data of the functional system, and to determine cyber analysis information using the cyber security data. The determination module is configured to obtain the physical analysis information and the cyber analysis information, and to determine a state of the functional system using the physical analysis information and the cyber analysis information. The state determined corresponds to at least one of physical condition or cyber security threat. The determination module is also configured to identify if the state corresponds to one or more of a non-malicious condition or a malicious condition.