A method and apparatus for performing communication in a wireless communication system are provided. The method includes receiving Measurement Gap (MG) configuration information related to the measurement gap, determining a subframe number specifying a starting point of the measurement gap based on the measurement gap configuration information, starting the measurement gap at an end of a subframe immediately before a subframe of the determined subframe number, performing a predetermined measurement operation during the measurement gap, and performing a predetermined operation in a subframe immediately after the measurement gap based on a duplexing mode of a User Equipment (UE) and a type of the subframe immediately before the measurement gap.