A method, non-transitory computer readable medium, and apparatus for classifying machine printed text and handwritten text in an input are disclosed. For example, the method defines a perspective for an auto-encoder, receives the input for the auto-encoder, wherein the input comprises a document comprising the machine printed text and the handwritten text, performs an encoding on the input using an auto-encoder to generate a classifier, applies the classifier on the input and generates an output that separates the machine printed text and the handwritten text in the input based on the classifier in accordance with the perspective.