Embodiments are disclosed for eye tracking systems and methods. An example eye tracking system comprises a plurality of light sources and a camera configured to capture an image of light from the light sources as reflected from an eye. The eye tracking system further comprises a logic device and a storage device storing instructions executable by the logic device to acquire frames of eye tracking data by iteratively projecting light from different combinations of light sources of the plurality of light sources and capturing an image of the eye during projection of each combination. The instructions may be further executable to select a selected combination of light sources for eye tracking based on a determination of occlusion detected in the image arising from a transparent or semi-transparent optical structure positioned between the eye and the camera and project light via the selected combination of light sources for eye tracking.