A method of operating a nuclear reactor is provided. The method includes defining a layer increment of a deposit layer modeling a deposit on a heat transfer surface of the nuclear reactor; periodically updating a thickness of the deposit layer by adding the layer increment to the deposit layer; recalculating properties of the deposit layer after each layer increment is added to the deposit layer; determining a temperature related variable of the heat transfer surface as a function of the recalculated properties of the deposit layer; and altering operation of the nuclear reactor when the temperature related variable of the heat transfer surface reaches a predetermined value. A method of modeling a deposit on a heat transfer surface of a nuclear reactor is also provided.