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公开(公告)号:EP3800586A1
公开(公告)日:2021-04-07
申请号:EP20179214.0
申请日:2020-06-10
发明人: HEGDE, Ganesh , SIMKA, Harsono S.
摘要: A method and a system for material design utilizing machine learning are provided, where the underlying joint distribution p(S,P) of structure (S) - property (P) relationships is explicitly learned simultaneously and is utilized to directly generate samples (S,P) in a single step utilizing generative techniques, without any additional processing steps. The subspace of structures that meet or exceed the target for property P is then identified utilizing conditional generation of the distribution (e.g., p(P)), or through randomly generating a large number of samples (S,P) and filtering (e.g., selecting) those that meet target property criteria.
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公开(公告)号:EP3703062A1
公开(公告)日:2020-09-02
申请号:EP20151364.5
申请日:2020-01-13
申请人: FUJITSU LIMITED
发明人: MITSUI, Takashi
摘要: A method for searching for a compound having a strong interaction with a target molecule includes growing a base fragment molecule and obtaining a grown molecule by performing molecular dynamics calculation using a reactive force field and bonding an atom to the base fragment molecule at a binding site of the target molecule.
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44.
公开(公告)号:EP4320622A1
公开(公告)日:2024-02-14
申请号:EP22785315.7
申请日:2022-04-05
申请人: Applied Biomath, LLC
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公开(公告)号:EP4227951A1
公开(公告)日:2023-08-16
申请号:EP22156423.0
申请日:2022-02-11
摘要: A computer-implemented method for predicting a value of a physical and/or chemical property (180a, 180b) of a molecule, said method uses as input a molecular structure of the molecule as an atom-bond-graph (100) comprising atoms of the molecular structure and bonds of the molecular structure as n nodes nodes of the atom-bond-graph (100), and provides as output the predicted value of the physical and/or chemical property (180a, 180b). The method comprises the steps of extracting (120) for each node of the atom-bond-graph (100) a feature vector of dimension d features , the feature vector comprising a node type, the node type preferably being one of atom, bond and global, and further data on the node in case of the node type being atom or bond, generating a feature matrix of dimension n nodes × features based on the extracted n nodes feature vectors; calculating a squared distance matrix D of dimension n nodes × n nodes based on distances between atoms and bonds of the molecular structure, and applying a trained neural network comprising a transformer using (140) the squared distance matrix D for self-attention decay on the feature matrix to generate a prediction (180a, 180b) of the value of the physical and/or chemical property of the molecule.
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47.
公开(公告)号:EP4165642A1
公开(公告)日:2023-04-19
申请号:EP21739828.8
申请日:2021-06-09
发明人: BISCHOF, Steven M. , KILGORE, Uriah J. , SYDORA, Orson L. , ESS, Daniel H. , KWON, Doo-Hyun , ROLLINS, Nicholas K.
IPC分类号: G16C20/50
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公开(公告)号:EP4162494A1
公开(公告)日:2023-04-12
申请号:EP21729950.2
申请日:2021-05-27
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公开(公告)号:EP4105935A1
公开(公告)日:2022-12-21
申请号:EP22162348.1
申请日:2010-11-22
摘要: A method for computational drug design using an evolutionary algorithm, comprises evaluating virtual molecules according to vector distance (VD) to at least one achievement objective that defines a desired ideal molecule. In one method the invention comprises defining a set of n achievement objectives (O A 1-n ), where n is at least one; defining a population (P G=0 ) of at least one molecule; selecting an initial population (P parent ) of at least one molecule (I 1 -I n ) from the population (P G=0 ); and evaluating members (I 1 -I n ) of the initial population (P parent ) against at least one of the n achievement objectives (O A 1-x ), where x is from 1 to n.
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