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公开(公告)号：US20240392368A1
公开(公告)日：2024-11-28
申请号：US18626998
申请日：2024-04-04
Applicant: Personalis, Inc.
Inventor： Gabor T. Bartha , Gemma Chandratillake , Richard Chen , Sarah Garcia , Hugo Yu Kor Lam , Mark R. Pratt , John West
IPC: C12Q1/6874 , C12Q1/6806 , C12Q1/6869 , G16B20/00 , G16B20/10 , G16B20/20 , G16B30/00 , G16B35/00 , G16B35/10 , G16B99/00 , G16C20/60
Abstract: This disclosure provides systems and methods for sample processing and data analysis. Sample processing may include nucleic acid sample processing and subsequent sequencing. Some or all of a nucleic acid sample may be sequenced to provide sequence information, which may be stored or otherwise maintained in an electronic storage location. The sequence information may be analyzed with the aid of a computer processor, and the analyzed sequence information may be stored in an electronic storage location that may include a pool or collection of sequence information and analyzed sequence information generated from the nucleic acid sample. Methods and systems of the present disclosure can be used, for example, for the analysis of a nucleic acid sample, for producing one or more libraries, and for producing biomedical reports. Methods and systems of the disclosure can aid in the diagnosis, monitoring, treatment, and prevention of one or more diseases and conditions.
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公开(公告)号：US20220098662A1
公开(公告)日：2022-03-31
申请号：US17548379
申请日：2021-12-10
Applicant: Personalis, Inc.
Inventor： Gabor T. Bartha , Gemma Chandratillake , Richard Chen , Sarah Garcia , Hugo Yu Kor Lam , Shujun Luo , Mark R. Pratt , John West
IPC: C12Q1/6874 , G16B20/00 , G16B30/00 , G16B99/00 , G16B20/10 , G16B20/20 , G16B35/10 , C12Q1/6806
Abstract: This disclosure provides systems and methods for sample processing and data analysis. Sample processing may include nucleic acid sample processing and subsequent sequencing. Some or all of a nucleic acid sample may be sequenced to provide sequence information, which may be stored or otherwise maintained in an electronic storage location. The sequence information may be analyzed with the aid of a computer processor, and the analyzed sequence information may be stored in an electronic storage location that may include a pool or collection of sequence information and analyzed sequence information generated from the nucleic acid sample. Methods and systems of the present disclosure can be used, for example, for the analysis of a nucleic acid sample, for producing one or more libraries, and for producing biomedical reports. Methods and systems of the disclosure can aid in the diagnosis, monitoring, treatment, and prevention of one or more diseases and conditions.
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公开(公告)号：US20210193260A1
公开(公告)日：2021-06-24
申请号：US16952507
申请日：2020-11-19
Applicant: Personalis, Inc.
Inventor： Jason Harris , Mark R. Pratt , John West , Richard Chen , Ming Li
Abstract: A computer-implemented method for processing and/or analyzing nucleic acid sequencing data comprises receiving a first data input and a second data input. The first data input comprises untargeted sequencing data generated from a first nucleic acid sample obtained from a subject. The second data input comprises target-specific sequencing data generated from a second nucleic acid sample obtained from the subject. Next, with the aid of a computer processor, the first data input and the second data input are combined to produce a combined data set. Next, an output derived from the combined data set is generated. The output is indicative of the presence or absence of one or more polymorphisms of the first nucleic acid sample and/or the second nucleic acid sample.
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公开(公告)号：US09727692B2
公开(公告)日：2017-08-08
申请号：US14871020
申请日：2015-09-30
Applicant: Personalis, Inc.
Inventor： Jason Harris , Mark R. Pratt , John West , Richard Chen , Ming Li
Abstract: A computer-implemented method for processing and/or analyzing nucleic acid sequencing data comprises receiving a first data input and a second data input. The first data input comprises untargeted sequencing data generated from a first nucleic acid sample obtained from a subject. The second data input comprises target-specific sequencing data generated from a second nucleic acid sample obtained from the subject. Next, with the aid of a computer processor, the first data input and the second data input are combined to produce a combined data set. Next, an output derived from the combined data set is generated. The output is indicative of the presence or absence of one or more polymorphisms of the first nucleic acid sample and/or the second nucleic acid sample.
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公开(公告)号：US11649499B2
公开(公告)日：2023-05-16
申请号：US18058376
申请日：2022-11-23
Applicant: Personalis, Inc.
Inventor： Gabor T. Bartha , Gemma Chandratillake , Richard Chen , Sarah Garcia , Hugo Yu Kor Lam , Shujun Luo , Mark R. Pratt , John West
IPC: C12Q1/6874 , G16B20/00 , G16B30/00 , G16B99/00 , G16B20/10 , G16B20/20 , G16B35/10 , C12Q1/6806 , C12Q1/6869 , G16B35/00 , G16C20/60
CPC classification number: C12Q1/6874 , C12Q1/6806 , G16B20/00 , G16B20/10 , G16B20/20 , G16B30/00 , G16B35/10 , G16B99/00 , C12Q1/6869 , G16B35/00 , G16C20/60
Abstract: This disclosure provides systems and methods for sample processing and data analysis. Sample processing may include nucleic acid sample processing and subsequent sequencing. Some or all of a nucleic acid sample may be sequenced to provide sequence information, which may be stored or otherwise maintained in an electronic storage location. The sequence information may be analyzed with the aid of a computer processor, and the analyzed sequence information may be stored in an electronic storage location that may include a pool or collection of sequence information and analyzed sequence information generated from the nucleic acid sample. Methods and systems of the present disclosure can be used, for example, for the analysis of a nucleic acid sample, for producing one or more libraries, and for producing biomedical reports. Methods and systems of the disclosure can aid in the diagnosis, monitoring, treatment, and prevention of one or more diseases and conditions.
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Patent Agency Ranking
公开(公告)号：US11456058B2
公开(公告)日：2022-09-27
申请号：US17746669
申请日：2022-05-17
Applicant: Personalis, Inc.
Inventor： Jason Harris , Mark R. Pratt , John West , Richard Chen , Ming Li
Abstract: A computer-implemented method for processing and/or analyzing nucleic acid sequencing data comprises receiving a first data input and a second data input. The first data input comprises untargeted sequencing data generated from a first nucleic acid sample obtained from a subject. The second data input comprises target-specific sequencing data generated from a second nucleic acid sample obtained from the subject. Next, with the aid of a computer processor, the first data input and the second data input are combined to produce a combined data set. Next, an output derived from the combined data set is generated. The output is indicative of the presence or absence of one or more polymorphisms of the first nucleic acid sample and/or the second nucleic acid sample.
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公开(公告)号：US11365446B2
公开(公告)日：2022-06-21
申请号：US17507578
申请日：2021-10-21
Applicant: Personalis, Inc.
Inventor： Gabor T. Bartha , Gemma Chandratillake , Richard Chen , Sarah Garcia , Hugo Yu Kor Lam , Shujun Luo , Mark R. Pratt , John West
IPC: C12Q1/6874 , G16B20/00 , G16B30/00 , G16B99/00 , G16B20/10 , G16B20/20 , G16B35/10 , C12Q1/6806 , C12Q1/6869 , G16B35/00 , G16C20/60
Abstract: This disclosure provides systems and methods for sample processing and data analysis. Sample processing may include nucleic acid sample processing and subsequent sequencing. Some or all of a nucleic acid sample may be sequenced to provide sequence information, which may be stored or otherwise maintained in an electronic storage location. The sequence information may be analyzed with the aid of a computer processor, and the analyzed sequence information may be stored in an electronic storage location that may include a pool or collection of sequence information and analyzed sequence information generated from the nucleic acid sample. Methods and systems of the present disclosure can be used, for example, for the analysis of a nucleic acid sample, for producing one or more libraries, and for producing biomedical reports. Methods and systems of the disclosure can aid in the diagnosis, monitoring, treatment, and prevention of one or more diseases and conditions.
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公开(公告)号：US11155867B2
公开(公告)日：2021-10-26
申请号：US17080474
申请日：2020-10-26
Applicant: Personalis, Inc.
Inventor： Gabor T. Bartha , Gemma Chandratillake , Richard Chen , Sarah Garcia , Hugo Yu Kor Lam , Shujun Luo , Mark R. Pratt , John West
IPC: C12Q1/6874 , G16B20/20 , G16B35/10 , C12Q1/6806 , C12Q1/6869 , G16B35/00 , G16B20/00 , G16B30/00 , G16B99/00 , G16B20/10 , G16C20/60
Abstract: This disclosure provides systems and methods for sample processing and data analysis. Sample processing may include nucleic acid sample processing and subsequent sequencing. Some or all of a nucleic acid sample may be sequenced to provide sequence information, which may be stored or otherwise maintained in an electronic storage location. The sequence information may be analyzed with the aid of a computer processor, and the analyzed sequence information may be stored in an electronic storage location that may include a pool or collection of sequence information and analyzed sequence information generated from the nucleic acid sample. Methods and systems of the present disclosure can be used, for example, for the analysis of a nucleic acid sample, for producing one or more libraries, and for producing biomedical reports. Methods and systems of the disclosure can aid in the diagnosis, monitoring, treatment, and prevention of one or more diseases and conditions.
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公开(公告)号：US20160362743A1
公开(公告)日：2016-12-15
申请号：US15222875
申请日：2016-07-28
Applicant: Personalis, Inc.
Inventor： Gabor T. Bartha , Gemma Chandratillake , Richard Chen , Sarah Garcia , Hugo Yu Kor Lam , Shujun Luo , Mark R. Pratt , John West
CPC classification number: C12Q1/6874 , C12Q1/6806 , C12Q1/6869 , C40B50/02 , G06F19/10 , G06F19/18 , G06F19/22
Abstract: This disclosure provides systems and methods for sample processing and data analysis. Sample processing may include nucleic acid sample processing and subsequent sequencing. Some or all of a nucleic acid sample may be sequenced to provide sequence information, which may be stored or otherwise maintained in an electronic storage location. The sequence information may be analyzed with the aid of a computer processor, and the analyzed sequence information may be stored in an electronic storage location that may include a pool or collection of sequence information and analyzed sequence information generated from the nucleic acid sample. Methods and systems of the present disclosure can be used, for example, for the analysis of a nucleic acid sample, for producing one or more libraries, and for producing biomedical reports. Methods and systems of the disclosure can aid in the diagnosis, monitoring, treatment, and prevention of one or more diseases and conditions.
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公开(公告)号：US20160019341A1
公开(公告)日：2016-01-21
申请号：US14871020
申请日：2015-09-30
Applicant: Personalis, Inc.
Inventor： Jason Harris , Mark R. Pratt , John West , Richard Chen , Ming Li
IPC: G06F19/22
Abstract: A computer-implemented method for processing and/or analyzing nucleic acid sequencing data comprises receiving a first data input and a second data input. The first data input comprises untargeted sequencing data generated from a first nucleic acid sample obtained from a subject. The second data input comprises target-specific sequencing data generated from a second nucleic acid sample obtained from the subject. Next, with the aid of a computer processor, the first data input and the second data input are combined to produce a combined data set. Next, an output derived from the combined data set is generated. The output is indicative of the presence or absence of one or more polymorphisms of the first nucleic acid sample and/or the second nucleic acid sample.
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