The invention discloses a scheduling method and system for stereoscopic warehouse carrying equipment. The method comprises: A, receiving a carrying application of a peripheral system; B, receiving a registration application of carrying equipment; C, sending a carrying instruction to the carrying equipment, and receiving a feedback instruction returned by the carrying equipment; and D, updating the carrying instruction according to the feedback instruction, and sending the updated carrying instruction to the corresponding carrying equipment or the peripheral system. The system comprises the peripheral system, the carrying equipment and a distribution module, wherein the distribution module is used for executing the steps of the scheduling method. The scheduling method and system for stereoscopic warehouse carrying equipment provided by the invention establish address label and register the capability of the carrying equipment, and deal with the carrying process by the distribution module, so that the connected coordination capability of the carrying equipment can be promoted, the influence of the equipment on the carrying process is reduced, and carrying is flexibly scheduled.