The invention discloses a hybrid control method of an electrical-gas interconnection integrated energy system. The hybrid control method comprises the following steps of 1) building an electrical-gasinterconnection integrated energy system optimization model according to slow dynamic characteristic of natural gas and pipe storage; 2) building prevention and control optimization dispatching modelof the electrical-gas interconnection integrated energy system by considering a key fault in an anticipated fault set; 3) building an after-fault correction control module by considering other faultsexcept for the key fault set in the anticipated fault set according to a prevention and control strategy; 4) building a hybrid control framework of the electrical-gas interconnection integrated energysystem by combining a prevention and control model and the correction control module; and 5) testing performance of the hybrid control method in the integrated energy system. With the method providedby the invention, the calculation efficiency is effectively improved, and the fault control strategy of the electrical-gas interconnection integrated energy system can be more accurately customized.