Methods, devices, estimators, controllers and algorithms are described for estimating working chamber air charge during engine operations. The described approaches and devices are well suited for use in dynamic firing level modulation controlled engines. Manifold pressure is estimated for a time corresponding to an induction event associated with a selected working cycle. The manifold pressure estimate accounts for impacts from one or more intervening potential induction events that will occur between the time that the manifold pressure is estimated and the time that the induction event associated with the selected working cycle occurs. The estimated manifold pressure is used in the estimation of the air charge for the selected working cycle. The described approach may be used to individually calculate the air charge for each induction event at any time that the engine is operating in a mode that can benefit from the individual cylinder air charge estimations.