A flame rod analysis system, methods for determining a condition of a flame and a flame rod, and circuits for determining a condition of a flame and a flame rod. The flame rod analysis system comprises energy storage connectable to a flame rod, a pulsed source connected to the energy storage and providing a voltage pulse or a current pulse, and a buffer to allow a processor to measure a buffered voltage at various time points. Flame rod analysis systems can distinguish between various flame conditions (no flame, low flame, etc.) while simultaneously characterizing the condition of the flame rod (shorted to ground, contaminated, etc.). Some flame rod analysis systems can directly measure the resistance of the flame rod.